WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C33H5.12a Sequence Name  C33H5.12a
Length (nt)  540   Chromosome Location  IV: 7790104-7790197
Chromosome . Primary Identifier  IV Chromosome Location . Start  7790104
Chromosome Location . End  7790197
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33H5.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04155 RSP-6, isoform a 20.5 179 Caenorhabditis elegans
 

Other

39 RNAi

WormBase ID
WBRNAi00066335
WBRNAi00041806
WBRNAi00066432
WBRNAi00066330
WBRNAi00066413
WBRNAi00066414
WBRNAi00068301
WBRNAi00068302
WBRNAi00080102
WBRNAi00011563
WBRNAi00081953
WBRNAi00029486
WBRNAi00066325
WBRNAi00066334
WBRNAi00066407
WBRNAi00066445
WBRNAi00068277
WBRNAi00068278
WBRNAi00068272
WBRNAi00068280
WBRNAi00068281
WBRNAi00068282
WBRNAi00068287
WBRNAi00068288
WBRNAi00068289
WBRNAi00068283
WBRNAi00068285
WBRNAi00068286
WBRNAi00068294
WBRNAi00068295

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C33H5.12a 7790104 7790197 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004703 rsp-6 C33H5.12 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C33H5.12a 7790104 7790197 -1
CDS:C33H5.12a 7790245 7790397 -1
CDS:C33H5.12a 7790837 7790944 -1
CDS:C33H5.12a 7790991 7791121 -1
CDS:C33H5.12a 7791175 7791228 -1

1 Sequence

Length
540

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C33H5.12a.1 C33H5.12a.1 798   IV: 7789847-7791229