WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00200630 Gene Name  C06A6.14
Sequence Name  ? C06A6.14 Organism  Caenorhabditis elegans
Automated Description  Is affected by daf-2 and pmt-2 based on microarray studies. Biotype  SO:0001263
Genetic Position  Length (nt)  ? 213
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00200630

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06A6.14 C06A6.14 213   IV: 7845656-7845868
 

Other

0 CDSs

0 RNAi Result

10 Allele

Public Name
gk964278
gk964500
gk963722
gk963417
gk963416
h11260
gk206205
gk741602
gk638292
gk322342

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00200630 7845656 7845868 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_7845869..7846621   753 IV: 7845869-7846621 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_downregulated
  Transcripts that showed significantly decreased expression in pmt-2(RNAi) animals comparing to control animals iinjected with empty vector. Fold-change > 1.5, ANOVA P values < 0.05. WBPaper00055482:pmt-2(RNAi)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00200630 7845656 7845868 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
213

1 Sequence Ontology Term