WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A6.2b.1 Sequence Name  C06A6.2b.1
Length (nt)  2509   Chromosome Location  IV: 7846622-7854409
Chromosome . Primary Identifier  IV Chromosome Location . Start  7846622
Chromosome Location . End  7854409 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015507 C06A6.2 C06A6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A6.2b C06A6.2b 2001   IV: 7846642-7846698

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A6.2b.1 7846622 7854409 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132086   77   IV: 7846622-7846698 Caenorhabditis elegans
Exon132089   163   IV: 7846748-7846910 Caenorhabditis elegans
Exon132091   142   IV: 7847249-7847390 Caenorhabditis elegans
Exon132093   229   IV: 7847620-7847848 Caenorhabditis elegans
Exon132095   408   IV: 7848627-7849034 Caenorhabditis elegans
Exon132099   67   IV: 7850251-7850317 Caenorhabditis elegans
Exon132105   277   IV: 7852365-7852641 Caenorhabditis elegans
Exon132111   115   IV: 7852688-7852802 Caenorhabditis elegans
Exon132117   141   IV: 7852877-7853017 Caenorhabditis elegans
Exon132122   250   IV: 7853071-7853320 Caenorhabditis elegans
Exon132133   640   IV: 7853770-7854409 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A6.2b.1 7846622 7854409 1

1 Sequence

Length
2509

1 Sequence Ontology Term

Identifier Name Description
transcript