WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A6.2a.1 Sequence Name  C06A6.2a.1
Length (nt)  2209   Chromosome Location  IV: 7846630-7854126
Chromosome . Primary Identifier  IV Chromosome Location . Start  7846630
Chromosome Location . End  7854126 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015507 C06A6.2 C06A6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A6.2a C06A6.2a 1992   IV: 7846642-7846698

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A6.2a.1 7846630 7854126 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132087   69   IV: 7846630-7846698 Caenorhabditis elegans
Exon132088   163   IV: 7846748-7846910 Caenorhabditis elegans
Exon132090   142   IV: 7847249-7847390 Caenorhabditis elegans
Exon132092   229   IV: 7847620-7847848 Caenorhabditis elegans
Exon132094   408   IV: 7848627-7849034 Caenorhabditis elegans
Exon132098   67   IV: 7850251-7850317 Caenorhabditis elegans
Exon132104   277   IV: 7852365-7852641 Caenorhabditis elegans
Exon132110   115   IV: 7852688-7852802 Caenorhabditis elegans
Exon132116   141   IV: 7852877-7853017 Caenorhabditis elegans
Exon132125   241   IV: 7853080-7853320 Caenorhabditis elegans
Exon132132   357   IV: 7853770-7854126 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A6.2a.1 7846630 7854126 1

1 Sequence

Length
2209

1 Sequence Ontology Term

Identifier Name Description
transcript