WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A6.2d.1 Sequence Name  C06A6.2d.1
Length (nt)  966   Chromosome Location  IV: 7850278-7853921
Chromosome . Primary Identifier  IV Chromosome Location . Start  7850278
Chromosome Location . End  7853921 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A6.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015507 C06A6.2 C06A6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A6.2d C06A6.2d 966   IV: 7850278-7850317

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A6.2d.1 7850278 7853921 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132101   40   IV: 7850278-7850317 Caenorhabditis elegans
Exon132107   277   IV: 7852365-7852641 Caenorhabditis elegans
Exon132113   115   IV: 7852688-7852802 Caenorhabditis elegans
Exon132119   141   IV: 7852877-7853017 Caenorhabditis elegans
Exon132126   241   IV: 7853080-7853320 Caenorhabditis elegans
Exon132129   152   IV: 7853770-7853921 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A6.2d.1 7850278 7853921 1

1 Sequence

Length
966

1 Sequence Ontology Term

Identifier Name Description
transcript