WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06C10.2.1 Sequence Name  T06C10.2.1
Length (nt)  1011   Chromosome Location  IV: 7879317-7881055
Chromosome . Primary Identifier  IV Chromosome Location . Start  7879317
Chromosome Location . End  7881055 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06C10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020288 srt-73 T06C10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06C10.2 T06C10.2 990   IV: 7879317-7879374

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06C10.2.1 7879317 7881055 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132159   58   IV: 7879317-7879374 Caenorhabditis elegans
Exon132160   164   IV: 7879516-7879679 Caenorhabditis elegans
Exon132161   105   IV: 7879731-7879835 Caenorhabditis elegans
Exon132162   132   IV: 7879883-7880014 Caenorhabditis elegans
Exon132163   108   IV: 7880062-7880169 Caenorhabditis elegans
Exon132164   111   IV: 7880260-7880370 Caenorhabditis elegans
Exon132165   197   IV: 7880672-7880868 Caenorhabditis elegans
Exon132166   136   IV: 7880920-7881055 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06C10.2.1 7879317 7881055 1

1 Sequence

Length
1011

1 Sequence Ontology Term

Identifier Name Description
transcript