WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C49H3.5b Sequence Name  C49H3.5b
Length (nt)  2494   Chromosome Location  IV: 7910646-7914267
Chromosome . Primary Identifier  IV Chromosome Location . Start  7910646
Chromosome Location . End  7914267 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49H3.5b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003827 ntl-4 C49H3.5 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C49H3.5b 7910646 7914267 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132305   36   IV: 7910646-7910681 Caenorhabditis elegans
Exon132310   69   IV: 7910746-7910814 Caenorhabditis elegans
Exon132315   96   IV: 7910957-7911052 Caenorhabditis elegans
Exon132320   532   IV: 7911108-7911639 Caenorhabditis elegans
Exon132329   173   IV: 7911690-7911862 Caenorhabditis elegans
Exon132334   65   IV: 7911908-7911972 Caenorhabditis elegans
Exon132339   68   IV: 7912024-7912091 Caenorhabditis elegans
Exon132344   179   IV: 7912142-7912320 Caenorhabditis elegans
Exon132349   453   IV: 7912375-7912827 Caenorhabditis elegans
Exon132354   283   IV: 7912875-7913157 Caenorhabditis elegans
Exon132355   540   IV: 7913728-7914267 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C49H3.5b 7910646 7914267 1

1 Sequence

Length
2494

1 Sequence Ontology Term

Identifier Name Description
transcript