WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49H3.10b.1 Sequence Name  C49H3.10b.1
Length (nt)  2859   Chromosome Location  IV: 7917240-7924032
Chromosome . Primary Identifier  IV Chromosome Location . Start  7917240
Chromosome Location . End  7924032 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49H3.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002080 xpo-3 C49H3.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49H3.10b C49H3.10b 2859   IV: 7917240-7917284

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49H3.10b.1 7917240 7924032 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132344   45   IV: 7917240-7917284 Caenorhabditis elegans
Exon132346   449   IV: 7917812-7918260 Caenorhabditis elegans
Exon132349   982   IV: 7918336-7919317 Caenorhabditis elegans
Exon132352   282   IV: 7919363-7919644 Caenorhabditis elegans
Exon132356   172   IV: 7919781-7919952 Caenorhabditis elegans
Exon132361   80   IV: 7922011-7922090 Caenorhabditis elegans
Exon132363   120   IV: 7922824-7922943 Caenorhabditis elegans
Exon132365   231   IV: 7922993-7923223 Caenorhabditis elegans
Exon132367   115   IV: 7923270-7923384 Caenorhabditis elegans
Exon132369   240   IV: 7923520-7923759 Caenorhabditis elegans
Exon132371   83   IV: 7923841-7923923 Caenorhabditis elegans
Exon132373   60   IV: 7923973-7924032 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49H3.10b.1 7917240 7924032 -1

1 Sequence

Length
2859

1 Sequence Ontology Term

Identifier Name Description
transcript