WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C49H3.11 Sequence Name  C49H3.11
Length (nt)  819   Chromosome Location  IV: 7925457-7925937
Chromosome . Primary Identifier  IV Chromosome Location . Start  7925457
Chromosome Location . End  7925937
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49H3.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04237 RPS-2 28.9 272 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00083867
WBRNAi00083879
WBRNAi00083891
WBRNAi00094316
WBRNAi00085464
WBRNAi00024870
WBRNAi00008537
WBRNAi00116393
WBRNAi00094049
WBRNAi00094237
WBRNAi00064938
WBRNAi00091082
WBRNAi00093763
WBRNAi00029996
WBRNAi00042835
WBRNAi00108896
WBRNAi00108951
WBRNAi00109006
WBRNAi00094432
WBRNAi00079168
WBRNAi00079209
WBRNAi00116374
WBRNAi00108841

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C49H3.11 7925457 7925937 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004471 rps-2 C49H3.11 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C49H3.11 7925457 7925937 -1
CDS:C49H3.11 7925985 7926185 -1
CDS:C49H3.11 7926235 7926371 -1

1 Sequence

Length
819

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C49H3.11.1 C49H3.11.1 998   IV: 7925298-7926391
Transcript:C49H3.11.2 C49H3.11.2 940   IV: 7925350-7926385