WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D12.4.2 Sequence Name  F20D12.4.2
Length (nt)  2589   Chromosome Location  IV: 7943614-7946825
Chromosome . Primary Identifier  IV Chromosome Location . Start  7943614
Chromosome Location . End  7946825 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D12.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017643 czw-1 F20D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D12.4 F20D12.4 2337   IV: 7943755-7943886

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D12.4.2 7943614 7946825 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132430   273   IV: 7943614-7943886 Caenorhabditis elegans
Exon132433   811   IV: 7944226-7945036 Caenorhabditis elegans
Exon132435   543   IV: 7945085-7945627 Caenorhabditis elegans
Exon132437   557   IV: 7945682-7946238 Caenorhabditis elegans
Exon132439   311   IV: 7946282-7946592 Caenorhabditis elegans
Exon132440   94   IV: 7946732-7946825 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D12.4.2 7943614 7946825 -1

1 Sequence

Length
2589

1 Sequence Ontology Term

Identifier Name Description
transcript