WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D12.6b.1 Sequence Name  F20D12.6b.1
Length (nt)  886   Chromosome Location  IV: 7953500-7955949
Chromosome . Primary Identifier  IV Chromosome Location . Start  7953500
Chromosome Location . End  7955949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D12.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000442 ceh-19 F20D12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D12.6b F20D12.6b 600   IV: 7953642-7953804

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D12.6b.1 7953500 7955949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132454   305   IV: 7953500-7953804 Caenorhabditis elegans
Exon132457   95   IV: 7954500-7954594 Caenorhabditis elegans
Exon132459   104   IV: 7954647-7954750 Caenorhabditis elegans
Exon132461   382   IV: 7955568-7955949 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D12.6b.1 7953500 7955949 -1

1 Sequence

Length
886

1 Sequence Ontology Term

Identifier Name Description
transcript