WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F20D12.1a Sequence Name  F20D12.1a
Length (nt)  3093   Chromosome Location  IV: 7957580-7958054
Chromosome . Primary Identifier  IV Chromosome Location . Start  7957580
Chromosome Location . End  7958054
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D12.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04431 CSR-1, isoform a 116.3 1030 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00081765
WBRNAi00082037
WBRNAi00082041
WBRNAi00045101
WBRNAi00082033
WBRNAi00069462
WBRNAi00103295
WBRNAi00094995
WBRNAi00025149
WBRNAi00008667
WBRNAi00031170

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F20D12.1a 7957580 7958054 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017641 csr-1 F20D12.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F20D12.1a 7957580 7958054 1
CDS:F20D12.1a 7958599 7958758 1
CDS:F20D12.1a 7958800 7958953 1
CDS:F20D12.1a 7958997 7959208 1
CDS:F20D12.1a 7959253 7959404 1
CDS:F20D12.1a 7959452 7959837 1
CDS:F20D12.1a 7959883 7960604 1
CDS:F20D12.1a 7960649 7960748 1
CDS:F20D12.1a 7960793 7961149 1
CDS:F20D12.1a 7961200 7961388 1
CDS:F20D12.1a 7961432 7961520 1
CDS:F20D12.1a 7961567 7961663 1

1 Sequence

Length
3093

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F20D12.1a.1 F20D12.1a.1 3662   IV: 7957267-7962157
Transcript:F20D12.1a.2 F20D12.1a.2 3599   IV: 7957568-7962157