WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57H12.3.1 Sequence Name  F57H12.3.1
Length (nt)  779   Chromosome Location  IV: 7977890-7979020
Chromosome . Primary Identifier  IV Chromosome Location . Start  7977890
Chromosome Location . End  7979020 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57H12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003879 ora-1 F57H12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57H12.3 F57H12.3 636   IV: 7977903-7977992

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57H12.3.1 7977890 7979020 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132555   103   IV: 7977890-7977992 Caenorhabditis elegans
Exon132556   387   IV: 7978289-7978675 Caenorhabditis elegans
Exon132557   289   IV: 7978732-7979020 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57H12.3.1 7977890 7979020 1

1 Sequence

Length
779

1 Sequence Ontology Term

Identifier Name Description
transcript