WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F57H12.7a Sequence Name  F57H12.7a
Length (nt)  789   Chromosome Location  IV: 7984014-7984243
Chromosome . Primary Identifier  IV Chromosome Location . Start  7984014
Chromosome Location . End  7984243
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57H12.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17128 MEC-17, isoform a 29.8 262 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048918
WBRNAi00015926
WBRNAi00033055

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F57H12.7a 7984014 7984243 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003178 mec-17 F57H12.7 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F57H12.7a 7984014 7984243 -1
CDS:F57H12.7a 7984317 7984563 -1
CDS:F57H12.7a 7984605 7984698 -1
CDS:F57H12.7a 7985498 7985635 -1
CDS:F57H12.7a 7987073 7987152 -1

1 Sequence

Length
789

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F57H12.7a.1 F57H12.7a.1 1032   IV: 7983802-7987183