WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26B2.3a.2 Sequence Name  C26B2.3a.2
Length (nt)  2360   Chromosome Location  IV: 8022655-8029436
Chromosome . Primary Identifier  IV Chromosome Location . Start  8022655
Chromosome Location . End  8029436 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26B2.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003625 nhr-31 C26B2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26B2.3a C26B2.3a 1752   IV: 8023249-8023380

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26B2.3a.2 8022655 8029436 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132638   726   IV: 8022655-8023380 Caenorhabditis elegans
Exon132643   150   IV: 8023821-8023970 Caenorhabditis elegans
Exon132647   174   IV: 8024171-8024344 Caenorhabditis elegans
Exon132651   274   IV: 8024390-8024663 Caenorhabditis elegans
Exon132655   482   IV: 8024764-8025245 Caenorhabditis elegans
Exon132660   155   IV: 8025522-8025676 Caenorhabditis elegans
Exon132663   278   IV: 8025760-8026037 Caenorhabditis elegans
Exon132668   121   IV: 8029316-8029436 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26B2.3a.2 8022655 8029436 -1

1 Sequence

Length
2360

1 Sequence Ontology Term

Identifier Name Description
transcript