WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26B2.3c.1 Sequence Name  C26B2.3c.1
Length (nt)  2228   Chromosome Location  IV: 8022666-8026037
Chromosome . Primary Identifier  IV Chromosome Location . Start  8022666
Chromosome Location . End  8026037 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26B2.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003625 nhr-31 C26B2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26B2.3c C26B2.3c 1635   IV: 8023249-8023380

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26B2.3c.1 8022666 8026037 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132640   715   IV: 8022666-8023380 Caenorhabditis elegans
Exon132644   150   IV: 8023821-8023970 Caenorhabditis elegans
Exon132648   174   IV: 8024171-8024344 Caenorhabditis elegans
Exon132652   274   IV: 8024390-8024663 Caenorhabditis elegans
Exon132656   482   IV: 8024764-8025245 Caenorhabditis elegans
Exon132661   155   IV: 8025522-8025676 Caenorhabditis elegans
Exon132664   278   IV: 8025760-8026037 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26B2.3c.1 8022666 8026037 -1

1 Sequence

Length
2228

1 Sequence Ontology Term

Identifier Name Description
transcript