WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18F3.2b.1 Sequence Name  C18F3.2b.1
Length (nt)  4953   Chromosome Location  IV: 8062669-8083666
Chromosome . Primary Identifier  IV Chromosome Location . Start  8062669
Chromosome Location . End  8083666 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18F3.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004732 sax-7 C18F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18F3.2b C18F3.2b 3987   IV: 8062732-8062780

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C18F3.2b.1 8062669 8083666 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132692   112   IV: 8062669-8062780 Caenorhabditis elegans
Exon132693   178   IV: 8063101-8063278 Caenorhabditis elegans
Exon132695   77   IV: 8063615-8063691 Caenorhabditis elegans
Exon132697   293   IV: 8064030-8064322 Caenorhabditis elegans
Exon132701   145   IV: 8067217-8067361 Caenorhabditis elegans
Exon132707   97   IV: 8070036-8070132 Caenorhabditis elegans
Exon132712   191   IV: 8074117-8074307 Caenorhabditis elegans
Exon132716   291   IV: 8074863-8075153 Caenorhabditis elegans
Exon132720   285   IV: 8075921-8076205 Caenorhabditis elegans
Exon132725   291   IV: 8076453-8076743 Caenorhabditis elegans
Exon132729   269   IV: 8076958-8077226 Caenorhabditis elegans
Exon132733   805   IV: 8077770-8078574 Caenorhabditis elegans
Exon132737   333   IV: 8078814-8079146 Caenorhabditis elegans
Exon132744   171   IV: 8081435-8081605 Caenorhabditis elegans
Exon132750   322   IV: 8082014-8082335 Caenorhabditis elegans
Exon132756   116   IV: 8082521-8082636 Caenorhabditis elegans
Exon132764   977   IV: 8082690-8083666 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C18F3.2b.1 8062669 8083666 1

1 Sequence

Length
4953

1 Sequence Ontology Term

Identifier Name Description
transcript