WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C18F3.2a Sequence Name  C18F3.2a
Length (nt)  3435   Chromosome Location  IV: 8067102-8067188
Chromosome . Primary Identifier  IV Chromosome Location . Start  8067102
Chromosome Location . End  8067188
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18F3.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37202 SAX-7, isoform a 127.6 1144 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001509
WBRNAi00040967
WBRNAi00011018
WBRNAi00101409
WBRNAi00110314

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C18F3.2a 8067102 8067188 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004732 sax-7 C18F3.2 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C18F3.2a 8067102 8067188 1
CDS:C18F3.2a 8067259 8067361 1
CDS:C18F3.2a 8070036 8070132 1
CDS:C18F3.2a 8074117 8074307 1
CDS:C18F3.2a 8074863 8075153 1
CDS:C18F3.2a 8075921 8076205 1
CDS:C18F3.2a 8076453 8076743 1
CDS:C18F3.2a 8076958 8077226 1
CDS:C18F3.2a 8077770 8078574 1
CDS:C18F3.2a 8078814 8079146 1
CDS:C18F3.2a 8081435 8081605 1
CDS:C18F3.2a 8082014 8082335 1
CDS:C18F3.2a 8082521 8082636 1
CDS:C18F3.2a 8082690 8082763 1

1 Sequence

Length
3435

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C18F3.2a.1 C18F3.2a.1 4942   IV: 8066865-8084033