WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18F3.2d.1 Sequence Name  C18F3.2d.1
Length (nt)  3444   Chromosome Location  IV: 8067102-8082763
Chromosome . Primary Identifier  IV Chromosome Location . Start  8067102
Chromosome Location . End  8082763 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18F3.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004732 sax-7 C18F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18F3.2d C18F3.2d 3444   IV: 8067102-8067188

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18F3.2d.1 8067102 8082763 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132700   87   IV: 8067102-8067188 Caenorhabditis elegans
Exon132704   103   IV: 8067259-8067361 Caenorhabditis elegans
Exon132709   97   IV: 8070036-8070132 Caenorhabditis elegans
Exon132714   191   IV: 8074117-8074307 Caenorhabditis elegans
Exon132718   291   IV: 8074863-8075153 Caenorhabditis elegans
Exon132722   285   IV: 8075921-8076205 Caenorhabditis elegans
Exon132727   291   IV: 8076453-8076743 Caenorhabditis elegans
Exon132731   269   IV: 8076958-8077226 Caenorhabditis elegans
Exon132735   805   IV: 8077770-8078574 Caenorhabditis elegans
Exon132739   333   IV: 8078814-8079146 Caenorhabditis elegans
Exon132746   171   IV: 8081435-8081605 Caenorhabditis elegans
Exon132752   322   IV: 8082014-8082335 Caenorhabditis elegans
Exon132758   116   IV: 8082521-8082636 Caenorhabditis elegans
Exon132761   83   IV: 8082681-8082763 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18F3.2d.1 8067102 8082763 1

1 Sequence

Length
3444

1 Sequence Ontology Term

Identifier Name Description
transcript