WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18F3.2f.1 Sequence Name  C18F3.2f.1
Length (nt)  2455   Chromosome Location  IV: 8080091-8084029
Chromosome . Primary Identifier  IV Chromosome Location . Start  8080091
Chromosome Location . End  8084029 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18F3.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004732 sax-7 C18F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18F3.2f C18F3.2f 750   IV: 8080530-8080596

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18F3.2f.1 8080091 8084029 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132740   506   IV: 8080091-8080596 Caenorhabditis elegans
Exon132748   171   IV: 8081435-8081605 Caenorhabditis elegans
Exon132754   322   IV: 8082014-8082335 Caenorhabditis elegans
Exon132760   116   IV: 8082521-8082636 Caenorhabditis elegans
Exon132765   1340   IV: 8082690-8084029 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18F3.2f.1 8080091 8084029 1

1 Sequence

Length
2455

1 Sequence Ontology Term

Identifier Name Description
transcript