WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y42H9AR.3b Sequence Name  Y42H9AR.3b
Length (nt)  1698   Chromosome Location  IV: 8104481-8104676
Chromosome . Primary Identifier  IV Chromosome Location . Start  8104481
Chromosome Location . End  8104676
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42H9AR.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49569 RABS-5, isoform b 63.9 565 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056444
WBRNAi00037026
WBRNAi00078215

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y42H9AR.3b 8104481 8104676 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021538 rabs-5 Y42H9AR.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y42H9AR.3b 8104481 8104676 -1
CDS:Y42H9AR.3b 8105164 8105586 -1
CDS:Y42H9AR.3b 8105637 8106051 -1
CDS:Y42H9AR.3b 8106141 8106302 -1
CDS:Y42H9AR.3b 8106676 8106922 -1
CDS:Y42H9AR.3b 8106968 8107165 -1
CDS:Y42H9AR.3b 8107542 8107598 -1

1 Sequence

Length
1698

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y42H9AR.3b.1 Y42H9AR.3b.1 1856   IV: 8104325-8107600