WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y42H9AR.1 Sequence Name  Y42H9AR.1
Length (nt)  1521   Chromosome Location  IV: 8113506-8113568
Chromosome . Primary Identifier  IV Chromosome Location . Start  8113506
Chromosome Location . End  8113568
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42H9AR.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25278 Y42H9AR.1 53.7 506 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056441
WBRNAi00037025
WBRNAi00080568

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y42H9AR.1 8113506 8113568 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021536 Y42H9AR.1 Y42H9AR.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y42H9AR.1 8113506 8113568 1
CDS:Y42H9AR.1 8113625 8113782 1
CDS:Y42H9AR.1 8113831 8114134 1
CDS:Y42H9AR.1 8114180 8114353 1
CDS:Y42H9AR.1 8114463 8115114 1
CDS:Y42H9AR.1 8115202 8115371 1

1 Sequence

Length
1521

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y42H9AR.1.2 Y42H9AR.1.2 1901   IV: 8113393-8115679
Transcript:Y42H9AR.1.1 Y42H9AR.1.1 1834   IV: 8113495-8115673