WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G8.10.1 Sequence Name  F42G8.10.1
Length (nt)  732   Chromosome Location  IV: 8128940-8130231
Chromosome . Primary Identifier  IV Chromosome Location . Start  8128940
Chromosome Location . End  8130231 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G8.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018361 ndub-11 F42G8.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G8.10 F42G8.10 546   IV: 8129126-8129189

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G8.10.1 8128940 8130231 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132860   250   IV: 8128940-8129189 Caenorhabditis elegans
Exon132861   99   IV: 8129575-8129673 Caenorhabditis elegans
Exon132862   140   IV: 8129722-8129861 Caenorhabditis elegans
Exon132863   121   IV: 8129932-8130052 Caenorhabditis elegans
Exon132864   122   IV: 8130110-8130231 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G8.10.1 8128940 8130231 -1

1 Sequence

Length
732

1 Sequence Ontology Term

Identifier Name Description
transcript