WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G8.4b.1 Sequence Name  F42G8.4b.1
Length (nt)  903   Chromosome Location  IV: 8141599-8142800
Chromosome . Primary Identifier  IV Chromosome Location . Start  8141599
Chromosome Location . End  8142800 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G8.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004057 pmk-3 F42G8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G8.4b F42G8.4b 903   IV: 8141599-8141669

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G8.4b.1 8141599 8142800 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132907   71   IV: 8141599-8141669 Caenorhabditis elegans
Exon132911   148   IV: 8141715-8141862 Caenorhabditis elegans
Exon132915   607   IV: 8142036-8142642 Caenorhabditis elegans
Exon132916   77   IV: 8142724-8142800 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G8.4b.1 8141599 8142800 1

1 Sequence

Length
903

1 Sequence Ontology Term

Identifier Name Description
transcript