WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0218.3.1 Sequence Name  B0218.3.1
Length (nt)  1671   Chromosome Location  IV: 8148794-8151266
Chromosome . Primary Identifier  IV Chromosome Location . Start  8148794
Chromosome Location . End  8151266 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0218.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004055 pmk-1 B0218.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0218.3 B0218.3 1134   IV: 8148806-8148954

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0218.3.1 8148794 8151266 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132951   161   IV: 8148794-8148954 Caenorhabditis elegans
Exon132952   566   IV: 8148999-8149564 Caenorhabditis elegans
Exon132953   365   IV: 8149932-8150296 Caenorhabditis elegans
Exon132954   579   IV: 8150688-8151266 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0218.3.1 8148794 8151266 1

1 Sequence

Length
1671

1 Sequence Ontology Term

Identifier Name Description
transcript