WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0218.8.1 Sequence Name  B0218.8.1
Length (nt)  974   Chromosome Location  IV: 8167164-8168760
Chromosome . Primary Identifier  IV Chromosome Location . Start  8167164
Chromosome Location . End  8168760 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0218.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015052 clec-52 B0218.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0218.8 B0218.8 927   IV: 8167204-8167311

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0218.8.1 8167164 8168760 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133000   148   IV: 8167164-8167311 Caenorhabditis elegans
Exon133001   120   IV: 8167438-8167557 Caenorhabditis elegans
Exon133002   50   IV: 8167603-8167652 Caenorhabditis elegans
Exon133003   106   IV: 8167915-8168020 Caenorhabditis elegans
Exon133004   59   IV: 8168065-8168123 Caenorhabditis elegans
Exon133005   389   IV: 8168168-8168556 Caenorhabditis elegans
Exon133006   102   IV: 8168659-8168760 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0218.8.1 8167164 8168760 -1

1 Sequence

Length
974

1 Sequence Ontology Term

Identifier Name Description
transcript