WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C07G1.3b Sequence Name  C07G1.3b
Length (nt)  2425   Chromosome Location  IV: 8177109-8188435
Chromosome . Primary Identifier  IV Chromosome Location . Start  8177109
Chromosome Location . End  8188435 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G1.3b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003961 pct-1 C07G1.3 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C07G1.3b 8177109 8188435 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133014   103   IV: 8177109-8177211 Caenorhabditis elegans
Exon133017   199   IV: 8177762-8177960 Caenorhabditis elegans
Exon133020   104   IV: 8178578-8178681 Caenorhabditis elegans
Exon133023   691   IV: 8184695-8185385 Caenorhabditis elegans
Exon133027   97   IV: 8185625-8185721 Caenorhabditis elegans
Exon133031   52   IV: 8185768-8185819 Caenorhabditis elegans
Exon133035   246   IV: 8186524-8186769 Caenorhabditis elegans
Exon133039   132   IV: 8187067-8187198 Caenorhabditis elegans
Exon133043   413   IV: 8187290-8187702 Caenorhabditis elegans
Exon133047   229   IV: 8187997-8188225 Caenorhabditis elegans
Exon133048   159   IV: 8188277-8188435 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C07G1.3b 8177109 8188435 1

1 Sequence

Length
2425

1 Sequence Ontology Term

Identifier Name Description
transcript