WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07G1.1.1 Sequence Name  C07G1.1.1
Length (nt)  3066   Chromosome Location  IV: 8206614-8213741
Chromosome . Primary Identifier  IV Chromosome Location . Start  8206614
Chromosome Location . End  8213741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006620 svh-1 C07G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07G1.1 C07G1.1 2856   IV: 8206749-8206840

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07G1.1.1 8206614 8213741 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133098   227   IV: 8206614-8206840 Caenorhabditis elegans
Exon133099   242   IV: 8207014-8207255 Caenorhabditis elegans
Exon133100   168   IV: 8207336-8207503 Caenorhabditis elegans
Exon133101   77   IV: 8207690-8207766 Caenorhabditis elegans
Exon133102   266   IV: 8207912-8208177 Caenorhabditis elegans
Exon133103   313   IV: 8208228-8208540 Caenorhabditis elegans
Exon133104   154   IV: 8208798-8208951 Caenorhabditis elegans
Exon133105   127   IV: 8208999-8209125 Caenorhabditis elegans
Exon133110   231   IV: 8209914-8210144 Caenorhabditis elegans
Exon133112   252   IV: 8210586-8210837 Caenorhabditis elegans
Exon133118   146   IV: 8212445-8212590 Caenorhabditis elegans
Exon133119   134   IV: 8212636-8212769 Caenorhabditis elegans
Exon133120   71   IV: 8212815-8212885 Caenorhabditis elegans
Exon133121   119   IV: 8212934-8213052 Caenorhabditis elegans
Exon133122   153   IV: 8213156-8213308 Caenorhabditis elegans
Exon133123   386   IV: 8213356-8213741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07G1.1.1 8206614 8213741 1

1 Sequence

Length
3066

1 Sequence Ontology Term

Identifier Name Description
transcript