WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09A12.2b.1 Sequence Name  T09A12.2b.1
Length (nt)  668   Chromosome Location  IV: 8222202-8223461
Chromosome . Primary Identifier  IV Chromosome Location . Start  8222202
Chromosome Location . End  8223461 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09A12.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020373 gpx-6 T09A12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09A12.2b T09A12.2b 567   IV: 8222232-8222380

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09A12.2b.1 8222202 8223461 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133145   179   IV: 8222202-8222380 Caenorhabditis elegans
Exon133147   220   IV: 8222840-8223059 Caenorhabditis elegans
Exon133149   134   IV: 8223140-8223273 Caenorhabditis elegans
Exon133150   135   IV: 8223327-8223461 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09A12.2b.1 8222202 8223461 1

1 Sequence

Length
668

1 Sequence Ontology Term

Identifier Name Description
transcript