WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07H8.6a.1 Sequence Name  K07H8.6a.1
Length (nt)  5057   Chromosome Location  IV: 8261157-8266455
Chromosome . Primary Identifier  IV Chromosome Location . Start  8261157
Chromosome Location . End  8266455 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07H8.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006930 vit-6 K07H8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07H8.6a K07H8.6a 4953   IV: 8261173-8261267

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07H8.6a.1 8261157 8266455 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133269   111   IV: 8261157-8261267 Caenorhabditis elegans
Exon133271   460   IV: 8261359-8261818 Caenorhabditis elegans
Exon133273   3948   IV: 8261876-8265823 Caenorhabditis elegans
Exon133275   267   IV: 8265872-8266138 Caenorhabditis elegans
Exon133277   271   IV: 8266185-8266455 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07H8.6a.1 8261157 8266455 1

1 Sequence

Length
5057

1 Sequence Ontology Term

Identifier Name Description
transcript