WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07H8.5.1 Sequence Name  K07H8.5.1
Length (nt)  1312   Chromosome Location  IV: 8268324-8272526
Chromosome . Primary Identifier  IV Chromosome Location . Start  8268324
Chromosome Location . End  8272526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07H8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019506 K07H8.5 K07H8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07H8.5 K07H8.5 972   IV: 8271071-8271123

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07H8.5.1 8268324 8272526 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133286   142   IV: 8268324-8268465 Caenorhabditis elegans
Exon133287   122   IV: 8270608-8270729 Caenorhabditis elegans
Exon133289   75   IV: 8271049-8271123 Caenorhabditis elegans
Exon133290   232   IV: 8271170-8271401 Caenorhabditis elegans
Exon133292   135   IV: 8271618-8271752 Caenorhabditis elegans
Exon133294   353   IV: 8271799-8272151 Caenorhabditis elegans
Exon133296   253   IV: 8272274-8272526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07H8.5.1 8268324 8272526 1

1 Sequence

Length
1312

1 Sequence Ontology Term

Identifier Name Description
transcript