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Single-cell RNA-Seq cell group 43_0 expressed in gonad. |
scVI 0.6.0 |
WBPaper00065841:43_0
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Genes found to be regulated in daf-16(mgDf50) by resveratrol treatment with p < 0.01. |
N.A. |
WBPaper00026929:Resveratrol_regulated_daf-16
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Transcripts that showed significantly decreased expression in daf-16(mu86);daf-2(e1370) neurons comparing to in daf-2(e1370) neurons at day 8adult stage. |
DESeq2, FDR < 0.05, fold change > 2. |
WBPaper00066978:daf-16(mu86)_downregulated_neuron
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Transcripts depleted at neuron synapses (enriched at the somatic fragments) by comparing presynaptic and somatic cell fragments labeled with different protein markers and sorted by FACS. |
DESeq2, FDR < 0.05 |
WBPaper00059027:neuron-synapses_depleted
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Single-cell RNA-Seq cell group 111_0 expressed in neuron. |
scVI 0.6.0 |
WBPaper00065841:111_0
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Genome-wide analysis of developmental and sex-regulated gene expression profile. |
self-organizing map |
cgc4489_group_13
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Bacteria infection: Burkholderia pseudomallei BpR15 |
Genes that showed increased expression in adult animals after 8 hour exposure to B. pseudomallei R15 vs. exposure to OP50 |
After array normalization, significance analysis of microarray was performed on data from individual time points (two class unpaired response) to identify genes with small but consistent changes. A false-discovery rate (FDR) of ~1% was used as criteria to consider a gene differentially regulated.Authors chose this particular FDR because it was the lowest FDR that did not significantly reduce the number of estimated true positives. |
WBPaper00044091:Bpseudomallei_induced_8h
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Single-cell RNA-Seq cell group 46_0 expressed in neuron. |
scVI 0.6.0 |
WBPaper00065841:46_0
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