WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2096.12.1 Sequence Name  D2096.12.1
Length (nt)  2570   Chromosome Location  IV: 8363463-8366376
Chromosome . Primary Identifier  IV Chromosome Location . Start  8363463
Chromosome Location . End  8366376 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2096.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017079 D2096.12 D2096.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2096.12 D2096.12 2292   IV: 8363465-8363690

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2096.12.1 8363463 8366376 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133546   228   IV: 8363463-8363690 Caenorhabditis elegans
Exon133547   72   IV: 8363742-8363813 Caenorhabditis elegans
Exon133548   259   IV: 8363860-8364118 Caenorhabditis elegans
Exon133549   178   IV: 8364164-8364341 Caenorhabditis elegans
Exon133550   415   IV: 8364424-8364838 Caenorhabditis elegans
Exon133551   856   IV: 8364892-8365747 Caenorhabditis elegans
Exon133552   562   IV: 8365815-8366376 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2096.12.1 8363463 8366376 1

1 Sequence

Length
2570

1 Sequence Ontology Term

Identifier Name Description
transcript