WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2096.3.1 Sequence Name  D2096.3.1
Length (nt)  2839   Chromosome Location  IV: 8366750-8375371
Chromosome . Primary Identifier  IV Chromosome Location . Start  8366750
Chromosome Location . End  8375371 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2096.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017071 aagr-1 D2096.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2096.3 D2096.3 2811   IV: 8366754-8366918

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2096.3.1 8366750 8375371 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133556   169   IV: 8366750-8366918 Caenorhabditis elegans
Exon133557   103   IV: 8367467-8367569 Caenorhabditis elegans
Exon133559   240   IV: 8367910-8368149 Caenorhabditis elegans
Exon133561   98   IV: 8368197-8368294 Caenorhabditis elegans
Exon133566   217   IV: 8370325-8370541 Caenorhabditis elegans
Exon133568   251   IV: 8370592-8370842 Caenorhabditis elegans
Exon133570   120   IV: 8370900-8371019 Caenorhabditis elegans
Exon133572   198   IV: 8371065-8371262 Caenorhabditis elegans
Exon133574   303   IV: 8371310-8371612 Caenorhabditis elegans
Exon133576   248   IV: 8372033-8372280 Caenorhabditis elegans
Exon133578   114   IV: 8372325-8372438 Caenorhabditis elegans
Exon133580   142   IV: 8372486-8372627 Caenorhabditis elegans
Exon133582   243   IV: 8372894-8373136 Caenorhabditis elegans
Exon133584   65   IV: 8373294-8373358 Caenorhabditis elegans
Exon133586   76   IV: 8373402-8373477 Caenorhabditis elegans
Exon133588   252   IV: 8375120-8375371 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2096.3.1 8366750 8375371 1

1 Sequence

Length
2839

1 Sequence Ontology Term

Identifier Name Description
transcript