WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2096.10.1 Sequence Name  D2096.10.1
Length (nt)  549   Chromosome Location  IV: 8387626-8389239
Chromosome . Primary Identifier  IV Chromosome Location . Start  8387626
Chromosome Location . End  8389239 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2096.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017077 D2096.10 D2096.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2096.10 D2096.10 372   IV: 8387777-8387875

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2096.10.1 8387626 8389239 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133579   102   IV: 8387626-8387727 Caenorhabditis elegans
Exon133581   102   IV: 8387774-8387875 Caenorhabditis elegans
Exon133583   100   IV: 8387935-8388034 Caenorhabditis elegans
Exon133585   183   IV: 8388272-8388454 Caenorhabditis elegans
Exon133590   62   IV: 8389178-8389239 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2096.10.1 8387626 8389239 -1

1 Sequence

Length
549

1 Sequence Ontology Term

Identifier Name Description
transcript