WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2096.11.2 Sequence Name  D2096.11.2
Length (nt)  3056   Chromosome Location  IV: 8388848-8394197
Chromosome . Primary Identifier  IV Chromosome Location . Start  8388848
Chromosome Location . End  8394197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2096.11.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017078 D2096.11 D2096.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2096.11 D2096.11 2184   IV: 8389147-8389381

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2096.11.2 8388848 8394197 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133587   534   IV: 8388848-8389381 Caenorhabditis elegans
Exon133592   338   IV: 8389949-8390286 Caenorhabditis elegans
Exon133595   120   IV: 8390711-8390830 Caenorhabditis elegans
Exon133598   366   IV: 8390882-8391247 Caenorhabditis elegans
Exon133601   192   IV: 8391326-8391517 Caenorhabditis elegans
Exon133604   369   IV: 8391644-8392012 Caenorhabditis elegans
Exon133607   189   IV: 8392095-8392283 Caenorhabditis elegans
Exon133610   366   IV: 8392441-8392806 Caenorhabditis elegans
Exon133613   189   IV: 8392855-8393043 Caenorhabditis elegans
Exon133619   91   IV: 8393654-8393744 Caenorhabditis elegans
Exon133622   101   IV: 8393798-8393898 Caenorhabditis elegans
Exon133626   74   IV: 8393951-8394024 Caenorhabditis elegans
Exon133628   127   IV: 8394071-8394197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2096.11.2 8388848 8394197 -1

1 Sequence

Length
3056

1 Sequence Ontology Term

Identifier Name Description
transcript