WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26A8.2.1 Sequence Name  T26A8.2.1
Length (nt)  1136   Chromosome Location  IV: 8426785-8428578
Chromosome . Primary Identifier  IV Chromosome Location . Start  8426785
Chromosome Location . End  8428578 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26A8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020825 tmem-231 T26A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26A8.2 T26A8.2 915   IV: 8427061-8427087

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26A8.2.1 8426785 8428578 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133676   92   IV: 8426785-8426876 Caenorhabditis elegans
Exon133678   90   IV: 8426998-8427087 Caenorhabditis elegans
Exon133679   111   IV: 8427392-8427502 Caenorhabditis elegans
Exon133681   79   IV: 8427547-8427625 Caenorhabditis elegans
Exon133683   116   IV: 8427677-8427792 Caenorhabditis elegans
Exon133685   138   IV: 8427837-8427974 Caenorhabditis elegans
Exon133687   212   IV: 8428026-8428237 Caenorhabditis elegans
Exon133690   298   IV: 8428281-8428578 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26A8.2.1 8426785 8428578 1

1 Sequence

Length
1136

1 Sequence Ontology Term

Identifier Name Description
transcript