WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T26A8.1 Sequence Name  T26A8.1
Length (nt)  2127   Chromosome Location  IV: 8433142-8433184
Chromosome . Primary Identifier  IV Chromosome Location . Start  8433142
Chromosome Location . End  8433184
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26A8.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07547 PDTF-1 77.4 708 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00116182
WBRNAi00116184
WBRNAi00000630
WBRNAi00054176
WBRNAi00019243
WBRNAi00035984
WBRNAi00116190
WBRNAi00116188
WBRNAi00116186
WBRNAi00116179

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T26A8.1 8433142 8433184 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020824 pdtf-1 T26A8.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:T26A8.1 8433142 8433184 1
CDS:T26A8.1 8433238 8433374 1
CDS:T26A8.1 8433429 8433639 1
CDS:T26A8.1 8433690 8433950 1
CDS:T26A8.1 8434096 8434267 1
CDS:T26A8.1 8434320 8434664 1
CDS:T26A8.1 8435715 8436007 1
CDS:T26A8.1 8436085 8436184 1
CDS:T26A8.1 8436254 8436413 1
CDS:T26A8.1 8436462 8436785 1
CDS:T26A8.1 8437491 8437571 1

1 Sequence

Length
2127

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T26A8.1.2 T26A8.1.2 2520   IV: 8433038-8437977
Transcript:T26A8.1.1 T26A8.1.1 2578   IV: 8433120-8438000