WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01B11.2a Sequence Name  T01B11.2a
Length (nt)  1404   Chromosome Location  IV: 8449458-8449695
Chromosome . Primary Identifier  IV Chromosome Location . Start  8449458
Chromosome Location . End  8449695
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B11.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE12894 EPPL-1, isoform a 51.6 467 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00052071
WBRNAi00017929
WBRNAi00026137
WBRNAi00026138
WBRNAi00034994
WBRNAi00027447
WBRNAi00115921

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01B11.2a 8449458 8449695 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020139 eppl-1 T01B11.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01B11.2a 8449458 8449695 -1
CDS:T01B11.2a 8449748 8449902 -1
CDS:T01B11.2a 8449956 8450499 -1
CDS:T01B11.2a 8450545 8450619 -1
CDS:T01B11.2a 8450838 8450994 -1
CDS:T01B11.2a 8451039 8451157 -1
CDS:T01B11.2a 8451637 8451752 -1

1 Sequence

Length
1404

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01B11.2a.1 T01B11.2a.1 1516   IV: 8449353-8451759