WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01B11.3 Sequence Name  T01B11.3
Length (nt)  891   Chromosome Location  IV: 8457281-8457361
Chromosome . Primary Identifier  IV Chromosome Location . Start  8457281
Chromosome Location . End  8457361
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B11.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43759 SYX-4 33.4 296 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00085578
WBRNAi00052072
WBRNAi00071868
WBRNAi00063809
WBRNAi00071428
WBRNAi00034995
WBRNAi00073247
WBRNAi00073249
WBRNAi00073248
WBRNAi00009088
WBRNAi00026139
WBRNAi00110576
WBRNAi00069908

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01B11.3 8457281 8457361 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006374 syx-4 T01B11.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01B11.3 8457281 8457361 1
CDS:T01B11.3 8457456 8457557 1
CDS:T01B11.3 8457785 8457961 1
CDS:T01B11.3 8458108 8458429 1
CDS:T01B11.3 8458629 8458837 1

1 Sequence

Length
891

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01B11.3.1 T01B11.3.1 988   IV: 8457280-8458933