WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01B11.5a Sequence Name  T01B11.5a
Length (nt)  1623   Chromosome Location  IV: 8461038-8461193
Chromosome . Primary Identifier  IV Chromosome Location . Start  8461038
Chromosome Location . End  8461193
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B11.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE12900 STR-176, isoform a 61.1 540 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00017931
WBRNAi00080700

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01B11.5a 8461038 8461193 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006220 str-176 T01B11.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01B11.5a 8461038 8461193 -1
CDS:T01B11.5a 8461239 8461562 -1
CDS:T01B11.5a 8461608 8461695 -1
CDS:T01B11.5a 8461741 8461989 -1
CDS:T01B11.5a 8462043 8462222 -1
CDS:T01B11.5a 8462279 8462520 -1
CDS:T01B11.5a 8462614 8462744 -1
CDS:T01B11.5a 8463562 8463814 -1

1 Sequence

Length
1623

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01B11.5a.1 T01B11.5a.1 1664   IV: 8460999-8463816