WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01B11.7.1 Sequence Name  T01B11.7.1
Length (nt)  1685   Chromosome Location  IV: 8464752-8472593
Chromosome . Primary Identifier  IV Chromosome Location . Start  8464752
Chromosome Location . End  8472593 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B11.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003837 oat-1 T01B11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01B11.7 T01B11.7 1581   IV: 8464852-8465007

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01B11.7.1 8464752 8472593 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133771   256   IV: 8464752-8465007 Caenorhabditis elegans
Exon133772   324   IV: 8465238-8465561 Caenorhabditis elegans
Exon133773   88   IV: 8465955-8466042 Caenorhabditis elegans
Exon133774   249   IV: 8466327-8466575 Caenorhabditis elegans
Exon133775   122   IV: 8471570-8471691 Caenorhabditis elegans
Exon133776   58   IV: 8471743-8471800 Caenorhabditis elegans
Exon133777   122   IV: 8471850-8471971 Caenorhabditis elegans
Exon133778   120   IV: 8472019-8472138 Caenorhabditis elegans
Exon133779   128   IV: 8472190-8472317 Caenorhabditis elegans
Exon133780   218   IV: 8472376-8472593 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01B11.7.1 8464752 8472593 -1

1 Sequence

Length
1685

1 Sequence Ontology Term

Identifier Name Description
transcript