WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28C12.12.1 Sequence Name  C28C12.12.1
Length (nt)  1302   Chromosome Location  IV: 8494550-8496363
Chromosome . Primary Identifier  IV Chromosome Location . Start  8494550
Chromosome Location . End  8496363 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28C12.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016182 C28C12.12 C28C12.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28C12.12 C28C12.12 1050   IV: 8494798-8494979

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C28C12.12.1 8494550 8496363 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133830   430   IV: 8494550-8494979 Caenorhabditis elegans
Exon133831   152   IV: 8495124-8495275 Caenorhabditis elegans
Exon133832   155   IV: 8495334-8495488 Caenorhabditis elegans
Exon133833   258   IV: 8495538-8495795 Caenorhabditis elegans
Exon133834   77   IV: 8495848-8495924 Caenorhabditis elegans
Exon133835   230   IV: 8496134-8496363 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C28C12.12.1 8494550 8496363 -1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
transcript