WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28C12.9.1 Sequence Name  C28C12.9.1
Length (nt)  2009   Chromosome Location  IV: 8496485-8498823
Chromosome . Primary Identifier  IV Chromosome Location . Start  8496485
Chromosome Location . End  8498823 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28C12.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001566 acdh-13 C28C12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28C12.9 C28C12.9 1854   IV: 8496640-8496787

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C28C12.9.1 8496485 8498823 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133836   303   IV: 8496485-8496787 Caenorhabditis elegans
Exon133837   524   IV: 8496843-8497366 Caenorhabditis elegans
Exon133838   117   IV: 8497457-8497573 Caenorhabditis elegans
Exon133839   360   IV: 8497616-8497975 Caenorhabditis elegans
Exon133840   513   IV: 8498021-8498533 Caenorhabditis elegans
Exon133841   88   IV: 8498580-8498667 Caenorhabditis elegans
Exon133842   104   IV: 8498720-8498823 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C28C12.9.1 8496485 8498823 -1

1 Sequence

Length
2009

1 Sequence Ontology Term

Identifier Name Description
transcript