WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28C12.10c.1 Sequence Name  C28C12.10c.1
Length (nt)  2739   Chromosome Location  IV: 8503674-8508553
Chromosome . Primary Identifier  IV Chromosome Location . Start  8503674
Chromosome Location . End  8508553 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28C12.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006450 tag-77 C28C12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28C12.10c C28C12.10c 2739   IV: 8503674-8503971

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C28C12.10c.1 8503674 8508553 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133862   298   IV: 8503674-8503971 Caenorhabditis elegans
Exon133866   202   IV: 8504057-8504258 Caenorhabditis elegans
Exon133872   100   IV: 8504312-8504411 Caenorhabditis elegans
Exon133878   717   IV: 8504492-8505208 Caenorhabditis elegans
Exon133884   249   IV: 8505277-8505525 Caenorhabditis elegans
Exon133890   321   IV: 8505569-8505889 Caenorhabditis elegans
Exon133896   276   IV: 8505944-8506219 Caenorhabditis elegans
Exon133902   100   IV: 8506368-8506467 Caenorhabditis elegans
Exon133908   225   IV: 8506792-8507016 Caenorhabditis elegans
Exon133916   239   IV: 8507093-8507331 Caenorhabditis elegans
Exon133918   12   IV: 8508542-8508553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C28C12.10c.1 8503674 8508553 -1

1 Sequence

Length
2739

1 Sequence Ontology Term

Identifier Name Description
transcript