WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28C12.10d.1 Sequence Name  C28C12.10d.1
Length (nt)  2745   Chromosome Location  IV: 8503674-8508553
Chromosome . Primary Identifier  IV Chromosome Location . Start  8503674
Chromosome Location . End  8508553 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28C12.10d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006450 tag-77 C28C12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28C12.10d C28C12.10d 2745   IV: 8503674-8503977

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C28C12.10d.1 8503674 8508553 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133863   304   IV: 8503674-8503977 Caenorhabditis elegans
Exon133867   202   IV: 8504057-8504258 Caenorhabditis elegans
Exon133873   100   IV: 8504312-8504411 Caenorhabditis elegans
Exon133879   717   IV: 8504492-8505208 Caenorhabditis elegans
Exon133885   249   IV: 8505277-8505525 Caenorhabditis elegans
Exon133891   321   IV: 8505569-8505889 Caenorhabditis elegans
Exon133897   276   IV: 8505944-8506219 Caenorhabditis elegans
Exon133903   100   IV: 8506368-8506467 Caenorhabditis elegans
Exon133909   225   IV: 8506792-8507016 Caenorhabditis elegans
Exon133917   239   IV: 8507093-8507331 Caenorhabditis elegans
Exon133919   12   IV: 8508542-8508553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C28C12.10d.1 8503674 8508553 -1

1 Sequence

Length
2745

1 Sequence Ontology Term

Identifier Name Description
transcript