WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G4.2b.1 Sequence Name  C09G4.2b.1
Length (nt)  1035   Chromosome Location  IV: 8535908-8537739
Chromosome . Primary Identifier  IV Chromosome Location . Start  8535908
Chromosome Location . End  8537739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015650 pkg-2 C09G4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G4.2b C09G4.2b 1035   IV: 8535908-8535978

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G4.2b.1 8535908 8537739 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133951   71   IV: 8535908-8535978 Caenorhabditis elegans
Exon133953   222   IV: 8536341-8536562 Caenorhabditis elegans
Exon133956   90   IV: 8536618-8536707 Caenorhabditis elegans
Exon133959   306   IV: 8536905-8537210 Caenorhabditis elegans
Exon133962   78   IV: 8537263-8537340 Caenorhabditis elegans
Exon133964   268   IV: 8537472-8537739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G4.2b.1 8535908 8537739 1

1 Sequence

Length
1035

1 Sequence Ontology Term

Identifier Name Description
transcript