WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G4.1a.1 Sequence Name  C09G4.1a.1
Length (nt)  1464   Chromosome Location  IV: 8540663-8544412
Chromosome . Primary Identifier  IV Chromosome Location . Start  8540663
Chromosome Location . End  8544412 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002043 hyl-1 C09G4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G4.1a C09G4.1a 1107   IV: 8540663-8540671

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G4.1a.1 8540663 8544412 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133968   9   IV: 8540663-8540671 Caenorhabditis elegans
Exon133969   122   IV: 8541095-8541216 Caenorhabditis elegans
Exon133972   91   IV: 8541764-8541854 Caenorhabditis elegans
Exon133975   194   IV: 8541915-8542108 Caenorhabditis elegans
Exon133978   150   IV: 8542822-8542971 Caenorhabditis elegans
Exon133981   235   IV: 8543179-8543413 Caenorhabditis elegans
Exon133984   213   IV: 8543460-8543672 Caenorhabditis elegans
Exon133989   450   IV: 8543963-8544412 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G4.1a.1 8540663 8544412 1

1 Sequence

Length
1464

1 Sequence Ontology Term

Identifier Name Description
transcript