WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59H11AM.4.1 Sequence Name  Y59H11AM.4.1
Length (nt)  701   Chromosome Location  IV: 8569144-8570353
Chromosome . Primary Identifier  IV Chromosome Location . Start  8569144
Chromosome Location . End  8570353 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59H11AM.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022008 Y59H11AM.4 Y59H11AM.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59H11AM.4 Y59H11AM.4 558   IV: 8569193-8569268

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59H11AM.4.1 8569144 8570353 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134009   125   IV: 8569144-8569268 Caenorhabditis elegans
Exon134010   46   IV: 8569316-8569361 Caenorhabditis elegans
Exon134011   70   IV: 8569406-8569475 Caenorhabditis elegans
Exon134012   48   IV: 8569522-8569569 Caenorhabditis elegans
Exon134013   177   IV: 8569618-8569794 Caenorhabditis elegans
Exon134014   179   IV: 8569841-8570019 Caenorhabditis elegans
Exon134015   56   IV: 8570298-8570353 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59H11AM.4.1 8569144 8570353 -1

1 Sequence

Length
701

1 Sequence Ontology Term

Identifier Name Description
transcript