WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59H11AR.2a.1 Sequence Name  Y59H11AR.2a.1
Length (nt)  3755   Chromosome Location  IV: 8585983-8594616
Chromosome . Primary Identifier  IV Chromosome Location . Start  8585983
Chromosome Location . End  8594616 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59H11AR.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022010 catp-7 Y59H11AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59H11AR.2a Y59H11AR.2a 3384   IV: 8585983-8586015

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59H11AR.2a.1 8585983 8594616 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134072   33   IV: 8585983-8586015 Caenorhabditis elegans
Exon134073   159   IV: 8589904-8590062 Caenorhabditis elegans
Exon134075   816   IV: 8590270-8591085 Caenorhabditis elegans
Exon134077   225   IV: 8591129-8591353 Caenorhabditis elegans
Exon134079   142   IV: 8591408-8591549 Caenorhabditis elegans
Exon134081   104   IV: 8591635-8591738 Caenorhabditis elegans
Exon134083   164   IV: 8591811-8591974 Caenorhabditis elegans
Exon134085   112   IV: 8592021-8592132 Caenorhabditis elegans
Exon134087   195   IV: 8592180-8592374 Caenorhabditis elegans
Exon134089   191   IV: 8592444-8592634 Caenorhabditis elegans
Exon134091   163   IV: 8592718-8592880 Caenorhabditis elegans
Exon134093   333   IV: 8592931-8593263 Caenorhabditis elegans
Exon134095   414   IV: 8593336-8593749 Caenorhabditis elegans
Exon134097   132   IV: 8593795-8593926 Caenorhabditis elegans
Exon134099   173   IV: 8593991-8594163 Caenorhabditis elegans
Exon134102   399   IV: 8594218-8594616 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59H11AR.2a.1 8585983 8594616 1

1 Sequence

Length
3755

1 Sequence Ontology Term

Identifier Name Description
transcript